SimpleBio.mnu
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# "simpleBio" popup menu for Jmol, devised for first-time users and simple models # e.g. Secondary School students of biomolecules --Biomodel-3-- # based on Jmol.mnu Jmol version 11.6.13 2008-11-24 13:39 en_US # updated for 14.3.3_2014.08.01 2014-08-01 07:38 # Only changed entries are set here. # Made by Angel Herráez, 2009-01-11; update 2014-11-12 # You are welcome to use this menu or any modification of it as you please. # Part I -- Menu Structure # ------------------------ @COLORSCHEME = cpk amino#PDB chain#PDB group#PDB shapely#PDB structure#PDB popupMenu = renderMenu colorMenu spinMenu selectMenuText - advancedMenu aboutMenu selectMenuText | Select ({0}) = hideNotSelectedCheckbox showSelectionsCheckbox - selectAll selectNone invertSelection - elementsComputedMenu - PDBproteinMenu PDBnucleicMenu PDBheteroMenu PDBcarboMenu PDBnoneOfTheAbove PDBheteroMenu | Hetero = allHetero Water Ligand - PDBheteroComputedMenu renderMenu | Style = renderCpkSpacefill renderBallAndStick renderSticks renderWireframe PDBrenderCartoonsOnly PDBrenderTraceOnly PDBstructureMenu - hbondMenu ssbondMenu - stereoMenu colorMenu | Color = [color_atoms]Menu [color_bonds]Menu [color_hbonds]Menu [color_ssbonds]Menu - [color_backbone]PDBMenu [color_cartoon]PDBsMenu [color_ribbon]PDBsMenu [color_rockets]PDBMenu [color_strands]PDBMenu [color_trace]PDBMenu - [color_background]Menu [color_atoms]Menu | Atoms = @COLORSCHEME - @COLOR - opaque translucent [color_backbone]PDBMenu | Backbone = none - @COLORSCHEME - @COLOR - opaque translucent [color_cartoon]PDBsMenu | Cartoon = none - @COLORSCHEME - @COLOR - opaque translucent [color_ribbon]PDBsMenu | Ribbons = none - @COLORSCHEME - @COLOR - opaque translucent [color_rockets]PDBMenu | Rockets = none - @COLORSCHEME - @COLOR - opaque translucent [color_strands]PDBMenu | Strands = none - @COLORSCHEME - @COLOR - opaque translucent [color_trace]PDBMenu | Trace = none - @COLORSCHEME - @COLOR - opaque translucent schemeMenu | By Scheme = cpk - amino#PDB chain#PDB group#PDB shapely#PDB structure#PDB spinMenu | Spin = spinOn spinOff advancedMenu | Advanced = choosePopupMenu languageComputedMenu showConsole choosePopupMenu | Choose menu = defaultMnu # Part II -- Key Definitions # -------------------------- defaultMnu | Use full Jmol menu = load menu "" # Part III -- Word Translations # -----------------------------