Persistent Parameters
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Persistent parameters
Associated to the app/applet and hence maintained when a new molecule is loaded:
Lighting
background <color> set ambientPercent <number> set diffusePercent <number> set specular <boolean> set specularPercent <number> set specularPower <number> set specularExponent <number>
Bonding
set autoBond <boolean> set forceAutoBond <boolean> set percentVdwAtom <number> set bondRadiusMilliAngstroms <number> set minBondDistance <number> set bondTolerance <number> set defaultLattice <coordinates> set allowEmbeddedScripts <boolean> set defaultLoadScript <text>
Other settings
set defaultColorScheme <text> set showMeasurements <boolean> set showHydrogens <boolean> set perspectiveDepth <boolean> color <element> <color> set axesUnitcell;
Nonpersistent parameters
These are reset when the model is removed (or another model is loaded).
Everything else, including e.g.:
- orientation
- spinning
- colors
- sizes
- visibility
- labels
- atom selection