Difference between revisions of "AtomSets/Carbohydrate"
AngelHerraez (talk | contribs) (carbohydrate atom set) |
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− | + | = 'carbohydrate' atom set = | |
+ | == Alphabetic == | ||
[A2G] = N-acetyl-alpha-D-galactosamine = GalNAc = 2-(acetylamino)-2-deoxy-alpha-D-galactopyranose (see also NGA) | [A2G] = N-acetyl-alpha-D-galactosamine = GalNAc = 2-(acetylamino)-2-deoxy-alpha-D-galactopyranose (see also NGA) | ||
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[XYS] = alpha-D-xylopyranose | [XYS] = alpha-D-xylopyranose | ||
+ | |||
+ | == Cathegorized == | ||
+ | === Monosaccharides === | ||
+ | |||
+ | === Disaccharides === | ||
+ | [CBI] = cellobiose = [β-D-Glc<sub>p</sub>(1->4)]<sub>2</sub> | ||
+ | |||
+ | [MAB] = mannobiose = [β-D-Man<sub>p</sub>(1->4)]<sub>2</sub> | ||
+ | |||
+ | [MAL] = maltose = [α-D-Glc<sub>p</sub>(1->4)]<sub>2</sub> | ||
+ | |||
+ | [SUC] = sucrose = β-D-Fru<sub>f</sub>(2->1)α-D-Glc<sub>p</sub> | ||
+ | |||
+ | [TRE] = trehalose = α-D-Glc<sub>p</sub>(1->1)α-D-Glc<sub>p</sub> | ||
+ | |||
+ | === Trisaccharides === | ||
+ | [CT3] = beta-cellotriose = [β-D-Glc<sub>p</sub>(1->4)]<sub>3</sub> | ||
+ | |||
+ | [CTR] = cellotriose = [β-D-Glc<sub>p</sub>(1->4)]<sub>2</sub>α-D-Glc<sub>p</sub> | ||
+ | |||
+ | [MLR] = maltotriose = [α-D-Glc<sub>p</sub>(1->4)]<sub>3</sub> | ||
+ | |||
+ | === Tetrasaccharides === | ||
+ | [CTT] = cellotetraose = [β-D-Glc<sub>p</sub>(1->4)]<sub>4</sub> | ||
+ | |||
+ | [MTT] = maltotetraose = [α-D-Glc<sub>p</sub>(1->4)]<sub>4</sub> |
Revision as of 18:54, 29 June 2011
Contents
'carbohydrate' atom set
Alphabetic
[A2G] = N-acetyl-alpha-D-galactosamine = GalNAc = 2-(acetylamino)-2-deoxy-alpha-D-galactopyranose (see also NGA)
[AFL] = <fucose> obsolete, replaced with FUL
[AGC] = <glucose> obsolete, replaced with GLC
[AHR] = alpha-L-arabinofuranose
[ARA] = alpha-L-arabinopyranose
[ARB] = beta-L-arabinopyranose
[BDF] = beta-D-fructopyranose (see also FRU)
[BDR] = beta-D-ribofuranose
[BGC] = beta-D-glucopyranose (see also GLC)
[BMA] = beta-D-mannopyranose (see also MAN)
[CBI] = cellobiose
[CT3] = beta-cellotriose
[CTR] = cellotriose
[CTT] = cellotetraose
[FCA] = alpha-D-fucose (see also FCB, FUC, FUL)
[FCB] = beta-D-fucose (see also FCA, FUC, FUL)
[FRU] = beta-D-fructofuranose (see also BDF)
[FUC] = alpha-L-fucose (see also FCA, FCB, FUL)
[FUL] = beta-L-fucose (see also FCA, FCB, FUC)
[GAL] = beta-D-galactopyranose (see also GLA)
[GCU] = alpha-D-glucopyranuronic acid (glucuronic acid)
[GLA] = alpha-D-galactopyranose (see also GAL)
[GLB] = <galactose> obsolete, replaced with GAL
[GLC] = alpha-D-glucopyranose (see also BGC)
[GUP] = alpha-L-gulopyranose
[LAT] = beta-lactose
[LXC] = beta-L-xylopyranose
[MAB] = mannobiose
[MAL] = maltose
[MAN] = alpha-D-mannopyranose (see also BMA)
[MLR] = maltotriose
[MTL] = D-mannitol
[MTT] = maltotetraose
[NAG] = N-acetylglucosamine = GlcNAc = 2-(acetylamino)-2-deoxy-beta-D-glucopyranose)
[NAN] = <sialic> obsolete, replaced with SIA
[NGA] = N-acetyl-beta-D-galactosamine = GalNAc = 2-(acetylamino)-2-deoxy-beta-D-galactopyranose (see also A2G)
[RAA] = <rhamnose> obsolete, replaced with RAM
[RAM] = alpha-L-rhamnose
[RHA] = 6-deoxy-mannose-1'-phosphate
[RIB] = alpha-D-ribofuranose
[RIP] = beta-D-ribopyranose
[SIA] = 5-N-acetyl-alpha-D-neuraminic acid (see also SLB)
[SLB] = 5-N-acetyl-beta-D-neuraminic acid (see also SIA)
[SOR] = D-glucitol = D-sorbitol
[SUC] = sucrose
[TRE] = trehalose
[XYL] = D-xylitol
[XYP] = beta-D-xylopyranose
[XYS] = alpha-D-xylopyranose
Cathegorized
Monosaccharides
Disaccharides
[CBI] = cellobiose = [β-D-Glcp(1->4)]2
[MAB] = mannobiose = [β-D-Manp(1->4)]2
[MAL] = maltose = [α-D-Glcp(1->4)]2
[SUC] = sucrose = β-D-Fruf(2->1)α-D-Glcp
[TRE] = trehalose = α-D-Glcp(1->1)α-D-Glcp
Trisaccharides
[CT3] = beta-cellotriose = [β-D-Glcp(1->4)]3
[CTR] = cellotriose = [β-D-Glcp(1->4)]2α-D-Glcp
[MLR] = maltotriose = [α-D-Glcp(1->4)]3
Tetrasaccharides
[CTT] = cellotetraose = [β-D-Glcp(1->4)]4
[MTT] = maltotetraose = [α-D-Glcp(1->4)]4