User talk:NicolasVervelle

Hi Nicholas, its Kevin again. The two heparin models I put up on my Jmol userpage no longer show up. I've tried viewing the page with firefox and internet explorer and in both the page loads but with errors. Have you any idea whats caused this?

Thanks

Kevin

I found the problem. The link on the wikipedia page was going to wiki.jmol.org/, I changed this to wiki.jmol.org:81/ and the models on my user page show up fine

Hi Nicholas, I want to add a jmol model to the wikipedia page entitled 'heparin'. I've downloaded the model '1HPNmod.pdb' and I can view it in the Jmol simple model example page by changing the uploaded file contents to 1HPNmod.pdb from ethanol.xyz. When I try to transfer this to the heparin page instead of displaying the model it just displays the source code. What am I doing wrong? any suggestions?

Thanks

Kevin

The Jmol extension is not yet installed on wikipedia, so it can't work for the moment. We are discussing with the wikipedia team so that the Jmol extension is added to wikipedia: the current status is that I have to make some modifications to the extension (security and usability issues) before going any further.

How come I can view the ethanol model?

I am not sure I understand. On which page (url) can you see the ethanol model ?

At wiki.jmol.org/index.php/Jmol_MediaWikki_Extension

That's normal.

• On the Jmol wiki (wiki.jmol.org), the Jmol extension is installed because I am the one maintaining this wiki, so I installed it as soon as I got something working.
• On Wikipedia (en.wikipedia.org), the Jmol extension is not installed. Wikipedia team has asked me first to make some modifications to the extension before considering installing it on Wikipedia. I need to find some time to do the modifications, and then contact them again. Hopefully, in the next weeks, I'll be able to find some time to do this (I want to do this before the end of August).

OK, Thanks, I didn't realise they were two different wikis.

Thanks for your help. I replied on my talk page to keep the discussion together. --Bduke 22:14, 10 December 2007 (CET)

upload is now working for pdb files. Does Jmol support mol2 files? If so can upload be OK'ed for them. I have put everything back on my talk page whether it works or not. The incontents pdb files are identical to those uploaded. The former fails. The latter works. Thanks for the support. --Bduke 23:53, 10 December 2007 (CET)

A few small points. First, the popup window at Jmol MediaWiki Extension does not seem to be working. Second, I am wanting to look again at the JmolExtension.php. I do not see where I can get that. I see the link following "All the files for the extension .." and that leads to downloading three files. What is the relationship between those three files and JmolExtension.php? I am puzzled. I have just tested versions 11.2.14 and 11.3.54 on my server. They are fine. Again, thanks.

Contributors

NicolasVervelle, AngelHerraez, Bduke, K.murphy